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Daniel McDonald

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Calour: an Interactive, Microbe-Centric Analysis Tool
Striped UniFrac: enabling microbiome analysis at unprecedented scale
Best practices for analysing microbiomes
American Gut: an Open Platform for Citizen Science Microbiome Research
Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information
A communal catalogue reveals Earth's multiscale microbial diversity
Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project
Ribosomal RNA, the lens into life

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