Zhenjiang Zech Xu

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Meta-Analysis Reveals Helicobacter Pylori Mutual Exclusivity and Reproducible Gastric Microbiome Alterations during Gastric Carcinoma Progression
Systematic Evaluation of the Viable Microbiome in the Human Oral and Gut Samples with Spike-in Gram+/– Bacteria
Systematic Evaluation of Antimicrobial Food Preservatives on Glucose Metabolism and Gut Microbiota in Healthy Mice
Cancer Type Classification Using Plasma Cell-Free RNAs Derived from Human and Microbes
Diurnal and Eating-Associated Microbial Patterns Revealed via High-Frequency Saliva Sampling
Microbial and Nonvolatile Chemical Diversities of Chinese Dark Teas Are Differed by Latitude and Pile Fermentation
Alterations in Gut Microbiota and Metabolites Associated with Altitude-Induced Cardiac Hypertrophy in Rats during Hypobaric Hypoxia Challenge
Gut Microbiome-Targeted Modulations Regulate Metabolic Profiles and Alleviate Altitude-Related Cardiac Hypertrophy in Rats
StrainPanDA: Linked Reconstruction of Strain Composition and Gene Content Profiles via Pangenome-Based Decomposition of Metagenomic Data
Gut Microbiota from Green Tea Polyphenol-Dosed Mice Improves Intestinal Epithelial Homeostasis and Ameliorates Experimental Colitis
SEQEL: A Tool for Biological Sequence Manipulation in Emacs
Zebrafish Model for Human Gut Microbiome-Related Studies: Advantages and Limitations
Toxicant Substitutes in Immunological Assays for Mycotoxins Detection: A Mini Review
PM2RA: A Framework for Detecting and Quantifying Relationship Alterations in Microbial Community
A Pilot Study of Microbial Succession in Human Rib Skeletal Remains during Terrestrial Decomposition
Alteration in Gut Microbiota Is Associated with Dysregulation of Cytokines and Glucocorticoid Therapy in Systemic Lupus Erythematosus
Vitamin D Metabolites and the Gut Microbiome in Older Men
Human Skin, Oral, and Gut Microbiomes Predict Chronological Age
Reproducible, Interactive, Scalable and Extensible Microbiome Data Science Using QIIME 2
Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems
Calour: An Interactive, Microbe-Centric Analysis Tool
Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information
Taxon-Specific Aerosolization of Bacteria and Viruses in an Experimental Ocean-Atmosphere Mesocosm
Exposure to Toxic Metals Triggers Unique Responses from the Rat Gut Microbiota
Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction
Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models
Guiding Longitudinal Sampling in IBD Cohorts
Microbial Effects of Livestock Manure Fertilization on Freshwater Aquaculture Ponds Rearing Tilapia (Oreochromis Shiranus) and North African Catfish (Clarias Gariepinus)
A Communal Catalogue Reveals Earth's Multiscale Microbial Diversity
Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
Normalization and Microbial Differential Abundance Strategies Depend upon Data Characteristics
Correlation Detection Strategies in Microbial Data Sets Vary Widely in Sensitivity and Precision
Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies
Open-Source Sequence Clustering Methods Improve the State Of the Art
Experiment-Assisted Secondary Structure Prediction with RNAstructure
Microbial Community Assembly and Metabolic Function during Mammalian Corpse Decomposition
Prediction of Secondary Structures Conserved in Multiple RNA Sequences
Secondary Structure Prediction of Single Sequences Using RNAstructure
Tiny Microbes, Enormous Impacts: What Matters in Gut Microbiome Studies?