Zhenjiang Zech Xu

Latest

Chlorogenic acid attenuates cadmium-induced intestinal injury in Sprague–Dawley rats
Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Trace Evidence Potential in Postmortem Skin Microbiomes: From Death Scene to Morgue
Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems
A gut microbiome signature for cirrhosis due to nonalcoholic fatty liver disease
Calour: an Interactive, Microbe-Centric Analysis Tool
Identification of new high affinity targets for Roquin based on structural conservation
Striped UniFrac: enabling microbiome analysis at unprecedented scale
Antibiotic-induced microbiome depletion alters metabolic homeostasis by affecting gut signaling and colonic metabolism
Best practices for analysing microbiomes
Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information
Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm
Exposure to toxic metals triggers unique responses from the rat gut microbiota
Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction
Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models
Microbial effects of livestock manure fertilization on freshwater aquaculture ponds rearing tilapia (Oreochromis shiranus) and North African catfish (Clarias gariepinus)
A communal catalogue reveals Earth's multiscale microbial diversity
Guiding longitudinal sampling in IBD cohorts
Microbiome Tools for Forensic Science
Evidence for fungal and chemodenitrification based N$_textrm2$O flux from nitrogen impacted coastal sediments
Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
Normalization and microbial differential abundance strategies depend upon data characteristics
Lifestyle chemistries from phones for individual profiling
Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
Microbiome-wide association studies link dynamic microbial consortia to disease
Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies
Open-Source Sequence Clustering Methods Improve the State Of the Art
Experiment-Assisted Secondary Structure Prediction with RNAstructure
Microbial community assembly and metabolic function during mammalian corpse decomposition
Prediction of Secondary Structures Conserved in Multiple RNA Sequences
Secondary Structure Prediction of Single Sequences Using RNAstructure
Tiny microbes, enormous impacts: what matters in gut microbiome studies?
Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project
Prediction of Early Childhood Caries via Spatial-Temporal Variations of Oral Microbiota
Discovery of Novel ncRNA Sequences in Multiple Genome Alignments on the Basis of Conserved and Stable Secondary Structures
Ribosomal RNA, the lens into life
Subsistence strategies in traditional societies distinguish gut microbiomes
Intestinal microbiota and immune related genes in sea cucumber (Apostichopus japonicus) response to dietary β-glucan supplementation
Dietary effects on human gut microbiome diversity
Which is more important for classifying microbial communities: who's there or what they can do?
Meta-analyses of human gut microbes associated with obesity and IBD
Structural basis for diversity in the SAM clan of riboswitches
Advancing Our Understanding of the Human Microbiome Using QIIME
Air proteins control differential TRAMP substrate specificity for nuclear RNA surveillance
Statistical evaluation of improvement in RNA secondary structure prediction
Deep sequencing-based identification of small non-coding RNAs in Streptomyces coelicolor
Multilign: an algorithm to predict secondary structures conserved in multiple RNA sequences