Feng Liu, Hui Lu, Biao Dong, Xiaochang Huang, Hongyu Cheng, Ru Qu, Yichen Hu, Luyun Zhong, Zhenni Guo, Yuehua You, Zhenjiang Zech Xu
(2023).
Systematic Evaluation of the Viable Microbiome in the Human Oral and Gut Samples with Spike-in Gram+/– Bacteria.
mSystems.
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Shanwen Chen, Yunfan Jin, Siqi Wang, Shaozhen Xing, Yingchao Wu, Yuhuan Tao, Yongchen Ma, Shuai Zuo, Xiaofan Liu, Yichen Hu, Hongyan Chen, Yuandeng Luo, Feng Xia, Chuanming Xie, Jianhua Yin, Xin Wang, Zhihua Liu, Ning Zhang, Zhenjiang Zech Xu, Zhi John Lu, Pengyuan Wang
(2022).
Cancer Type Classification Using Plasma Cell-Free RNAs Derived from Human and Microbes.
eLife.
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Ya-Shuai Kong, Hong-Yu Ren, Rui Liu, Ricardo R. da Silva, Alexander A. Aksenov, Alexey V. Melnik, Ming Zhao, Miao-Miao Le, Zhi-Wei Ren, Feng-Qing Xu, Xiao-Wei Yan, Li-Jun Yu, Yu Zhou, Zhong-Wen Xie, Da-Xiang Li, Xiao-Chun Wan, Yan-Hua Long, Zhenjiang Zech Xu, Tie-Jun Ling
(2022).
Microbial and Nonvolatile Chemical Diversities of Chinese Dark Teas Are Differed by Latitude and Pile Fermentation.
J. Agric. Food Chem..
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Zhiyuan Pan, Yichen Hu, Zongyu Huang, Ni Han, Yan Li, Xiaomei Zhuang, Jiye Yin, Hui Peng, Quansheng Gao, Wenpeng Zhang, Yong Huang, Yujun Cui, Yujing Bi, Zhenjiang Zech Xu, Ruifu Yang
(2022).
Alterations in Gut Microbiota and Metabolites Associated with Altitude-Induced Cardiac Hypertrophy in Rats during Hypobaric Hypoxia Challenge.
Sci. China Life Sci..
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Yichen Hu, Zhiyuan Pan, Zongyu Huang, Yan Li, Ni Han, Xiaomei Zhuang, Hui Peng, Quansheng Gao, Qing Wang, B. J. Yang Lee, Heping Zhang, Ruifu Yang, Yujing Bi, Zhenjiang Zech Xu
(2022).
Gut Microbiome-Targeted Modulations Regulate Metabolic Profiles and Alleviate Altitude-Related Cardiac Hypertrophy in Rats.
Microbiology Spectrum.
DOI
Zhenhua Wu, Shimeng Huang, Tiantian Li, Na Li, Dandan Han, Bing Zhang, Zhenjiang Zech Xu, Shiyi Zhang, Jiaman Pang, Shilan Wang, Guolong Zhang, Jiangchao Zhao, Junjun Wang
(2021).
Gut Microbiota from Green Tea Polyphenol-Dosed Mice Improves Intestinal Epithelial Homeostasis and Ameliorates Experimental Colitis.
Microbiome.
DOI
Robert L. Thomas, Lingjing Jiang, John S. Adams, Zhenjiang Zech Xu, Jian Shen, Stefan Janssen, Gail Ackermann, Dirk Vanderschueren, Steven Pauwels, Rob Knight, Eric S. Orwoll, Deborah M. Kado
(2020).
Vitamin D Metabolites and the Gut Microbiome in Older Men.
Nature Communications.
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Mengchen Guo, Huixia Wang, Sixie Xu, Yaoyao Zhuang, Jingang An, Chuan Su, Yankai Xia, Jingyun Chen, Zhenjiang Zech Xu, Qisha Liu, Jianwei Wang, Zhou Dan, Kun Chen, Xiaoting Luan, Zhi Liu, Kangjian Liu, Faming Zhang, Yumin Xia, Xingyin Liu
(2020).
Alteration in Gut Microbiota Is Associated with Dysregulation of Cytokines and Glucocorticoid Therapy in Systemic Lupus Erythematosus.
Gut Microbes.
DOI
Xiaoquan Su, Gongchao Jing, Zheng Sun, Lu Liu, Zhenjiang Xu, Daniel McDonald, Zengbin Wang, Honglei Wang, Antonio Gonzalez, Yufeng Zhang, Shi Huang, Gavin Huttley, Rob Knight, Jian Xu
(2020).
Multiple-Disease Detection and Classification across Cohorts via Microbiome Search.
mSystems.
DOI
Shi Huang, Niina Haiminen, Anna-Paola Carrieri, Rebecca Hu, Lingjing Jiang, Laxmi Parida, Baylee Russell, Celeste Allaband, Amir Zarrinpar, Yoshiki Vázquez-Baeza, Pedro Belda-Ferre, Hongwei Zhou, Ho-Cheol Kim, Austin D. Swafford, Rob Knight, Zhenjiang Zech Xu
(2020).
Human Skin, Oral, and Gut Microbiomes Predict Chronological Age.
mSystems.
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Qiyun Zhu, Uyen Mai, Wayne Pfeiffer, Stefan Janssen, Francesco Asnicar, Jon G. Sanders, Pedro Belda-Ferre, Gabriel A. Al-Ghalith, Evguenia Kopylova, Daniel McDonald, Tomasz Kosciolek, John B. Yin, Shi Huang, Nimaichand Salam, Jian-Yu Jiao, Zijun Wu, Zhenjiang Z. Xu, Kalen Cantrell, Yimeng Yang, Erfan Sayyari, Maryam Rabiee, James T. Morton, Sheila Podell, Dan Knights, Wen-Jun Li, Curtis Huttenhower, Nicola Segata, Larry Smarr, Siavash Mirarab, Rob Knight
(2019).
Phylogenomics of 10,575 Genomes Reveals Evolutionary Proximity between Domains Bacteria and Archaea.
Nat Commun.
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Jon G. Sanders, Sergey Nurk, Rodolfo A. Salido, Jeremiah Minich, Zhenjiang Z. Xu, Qiyun Zhu, Cameron Martino, Marcus Fedarko, Timothy D. Arthur, Feng Chen, Brigid S. Boland, Greg C. Humphrey, Caitriona Brennan, Karenina Sanders, James Gaffney, Kristen Jepsen, Mahdieh Khosroheidari, Cliff Green, Marlon Liyanage, Jason W. Dang, Vanessa V. Phelan, Robert A. Quinn, Anton Bankevich, John T. Chang, Tariq M. Rana, Douglas J. Conrad, William J. Sandborn, Larry Smarr, Pieter C. Dorrestein, Pavel A. Pevzner, Rob Knight
(2019).
Optimizing Sequencing Protocols for Leaderboard Metagenomics by Combining Long and Short Reads.
Genome Biology.
DOI
Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al-Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin J. Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo-Rodríguez, John Chase, Emily K. Cope, Ricardo Da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio Gonzalez, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin A. Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kosciolek, Jorden Kreps, Morgan G. I. Langille, Joslynn Lee, Ruth Ley, Yong-Xin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D. Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney C. Morgan, Jamie T. Morton, Ahmad Turan Naimey, Jose A. Navas-Molina, Louis Felix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L. Peoples, Daniel Petras, Mary Lai Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke R. Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez-Baeza, Emily Vogtmann, Max von Hippel, William Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C. Weber, Charles H. D. Williamson, Amy D. Willis, Zhenjiang Zech Xu, Jesse R. Zaneveld, Yilong Zhang, Qiyun Zhu, Rob Knight, J. Gregory Caporaso
(2019).
Reproducible, Interactive, Scalable and Extensible Microbiome Data Science Using QIIME 2.
Nat Biotechnol.
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Anupriya Tripathi, Zhenjiang Zech Xu, Jin Xue, Orit Poulsen, Antonio Gonzalez, Gregory Humphrey, Michael J. Meehan, Alexey V. Melnik, Gail Ackermann, Dan Zhou, Atul Malhotra, Gabriel G. Haddad, Pieter C. Dorrestein, Rob Knight
(2019).
Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems.
mSystems.
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Cyrielle Caussy, Anupriya Tripathi, Greg Humphrey, Shirin Bassirian, Seema Singh, Claire Faulkner, Ricki Bettencourt, Emily Rizo, Lisa Richards, Zhenjiang Z. Xu, Michael R. Downes, Ronald M. Evans, David A. Brenner, Claude B. Sirlin, Rob Knight, Rohit Loomba
(2019).
A Gut Microbiome Signature for Cirrhosis Due to Nonalcoholic Fatty Liver Disease.
Nature Communications.
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Zhenjiang Zech Xu, Amnon Amir, Jon Sanders, Qiyun Zhu, James T. Morton, Molly C. Bletz, Anupriya Tripathi, Shi Huang, Daniel McDonald, Lingjing Jiang, Rob Knight
(2019).
Calour: An Interactive, Microbe-Centric Analysis Tool.
mSystems.
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Rob Knight, Alison Vrbanac, Bryn C. Taylor, Alexander Aksenov, Chris Callewaert, Justine Debelius, Antonio Gonzalez, Tomasz Kosciolek, Laura-Isobel McCall, Daniel McDonald, Alexey V. Melnik, James T. Morton, Jose Navas, Robert A. Quinn, Jon G. Sanders, Austin D. Swafford, Luke R. Thompson, Anupriya Tripathi, Zhenjiang Z. Xu, Jesse R. Zaneveld, Qiyun Zhu, J. Gregory Caporaso, Pieter C. Dorrestein
(2018).
Best Practices for Analysing Microbiomes.
Nat Rev Microbiol.
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Stefan Janssen, Daniel McDonald, Antonio Gonzalez, Jose A. Navas-Molina, Lingjing Jiang, Zhenjiang Zech Xu, Kevin Winker, Deborah M. Kado, Eric Orwoll, Mark Manary, Siavash Mirarab, Rob Knight
(2018).
Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information.
mSystems.
DOI
Daniel McDonald, Embriette Hyde, Justine W. Debelius, James T. Morton, Antonio Gonzalez, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew A. Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kosciolek, Joshua Ladau, Jeff Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, Jose Navas-Molina, Tanya T. Nguyen, Shyamal Peddada, Pavel Pevzner, Katherine S. Pollard, Gholamali Rahnavard, Adam Robbins-Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke R. Thompson, Anupriya Tripathi, Yoshiki Vázquez-Baeza, Alison Vrbanac, Paul Wischmeyer, Elaine Wolfe, Qiyun Zhu, The American Gut Consortium, Rob Knight
(2018).
American Gut: An Open Platform for Citizen Science Microbiome Research.
mSystems.
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Jennifer M. Michaud, Luke R. Thompson, Drishti Kaul, Josh L. Espinoza, R. Alexander Richter, Zhenjiang Zech Xu, Christopher Lee, Kevin M. Pham, Charlotte M. Beall, Francesca Malfatti, Farooq Azam, Rob Knight, Michael D. Burkart, Christopher L. Dupont, Kimberly A. Prather
(2018).
Taxon-Specific Aerosolization of Bacteria and Viruses in an Experimental Ocean-Atmosphere Mesocosm.
Nature Communications.
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Joshua B. Richardson, Blair C. R. Dancy, Cassandra L. Horton, Young S. Lee, Michael S. Madejczyk, Zhenjiang Zech Xu, Gail Ackermann, Gregory Humphrey, Gustavo Palacios, Rob Knight, John A. Lewis
(2018).
Exposure to Toxic Metals Triggers Unique Responses from the Rat Gut Microbiota.
Scientific Reports.
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Youlian Zhou, Zhenjiang Zech Xu, Yan He, Yunsheng Yang, Le Liu, Qianyun Lin, Yuqiang Nie, Mingsong Li, Fachao Zhi, Side Liu, Amnon Amir, Antonio González, Anupriya Tripathi, Minhu Chen, Gary D. Wu, Rob Knight, Hongwei Zhou, Ye Chen
(2018).
Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction.
mSystems.
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Luke R. Thompson, Jon G. Sanders, Daniel McDonald, Amnon Amir, Joshua Ladau, Kenneth J. Locey, Robert J. Prill, Anupriya Tripathi, Sean M. Gibbons, Gail Ackermann, Jose A. Navas-Molina, Stefan Janssen, Evguenia Kopylova, Yoshiki Vázquez-Baeza, Antonio González, James T. Morton, Siavash Mirarab, Zhenjiang Zech Xu, Lingjing Jiang, Mohamed F. Haroon, Jad Kanbar, Qiyun Zhu, Se Jin Song, Tomasz Kosciolek, Nicholas A. Bokulich, Joshua Lefler, Colin J. Brislawn, Gregory Humphrey, Sarah M. Owens, Jarrad Hampton-Marcell, Donna Berg-Lyons, Valerie McKenzie, Noah Fierer, Jed A. Fuhrman, Aaron Clauset, Rick L. Stevens, Ashley Shade, Katherine S. Pollard, Kelly D. Goodwin, Janet K. Jansson, Jack A. Gilbert, Rob Knight, The Earth Microbiome Project Consortium, Jose L. Agosto Rivera, Lisa Al-Moosawi, John Alverdy, Katherine R. Amato, Jason Andras, Largus T. Angenent, Dionysios A. Antonopoulos, Amy Apprill, David Armitage, Kate Ballantine, Jirˇí Bárta, Julia K. Baum, Allison Berry, Ashish Bhatnagar, Monica Bhatnagar, Jennifer F. Biddle, Lucie Bittner, Bazartseren Boldgiv, Eric Bottos, Donal M. Boyer, Josephine Braun, William Brazelton, Francis Q. Brearley, Alexandra H. Campbell, J. Gregory Caporaso, Cesar Cardona, JoLynn Carroll, S. Craig Cary, Brenda B. Casper, Trevor C. Charles, Haiyan Chu, Danielle C. Claar, Robert G. Clark, Jonathan B. Clayton, Jose C. Clemente, Alyssa Cochran, Maureen L. Coleman, Gavin Collins, Rita R. Colwell, Mónica Contreras, Benjamin B. Crary, Simon Creer, Daniel A. Cristol, Byron C. Crump, Duoying Cui, Sarah E. Daly, Liliana Davalos, Russell D. Dawson, Jennifer Defazio, Frédéric Delsuc, Hebe M. Dionisi, Maria Gloria Dominguez-Bello, Robin Dowell, Eric A. Dubinsky, Peter O. Dunn, Danilo Ercolini, Robert E. Espinoza, Vanessa Ezenwa, Nathalie Fenner, Helen S. Findlay, Irma D. Fleming, Vincenzo Fogliano, Anna Forsman, Chris Freeman, Elliot S. Friedman, Giancarlo Galindo, Liza Garcia, Maria Alexandra Garcia-Amado, David Garshelis, Robin B. Gasser, Gunnar Gerdts, Molly K. Gibson, Isaac Gifford, Ryan T. Gill, Tugrul Giray, Antje Gittel, Peter Golyshin, Donglai Gong, Hans-Peter Grossart, Kristina Guyton, Sarah-Jane Haig, Vanessa Hale, Ross Stephen Hall, Steven J. Hallam, Kim M. Handley, Nur A. Hasan, Shane R. Haydon, Jonathan E. Hickman, Glida Hidalgo, Kirsten S. Hofmockel, Jeff Hooker, Stefan Hulth, Jenni Hultman, Embriette Hyde, Juan Diego Ibáñez-Álamo, Julie D. Jastrow, Aaron R. Jex, L. Scott Johnson, Eric R. Johnston, Stephen Joseph, Stephanie D. Jurburg, Diogo Jurelevicius, Anders Karlsson, Roger Karlsson, Seth Kauppinen, Colleen T. E. Kellogg, Suzanne J. Kennedy, Lee J. Kerkhof, Gary M. King, George W. Kling, Anson V. Koehler, Monika Krezalek, Jordan Kueneman, Regina Lamendella, Emily M. Landon, Kelly Lane-deGraaf, Julie LaRoche, Peter Larsen, Bonnie Laverock, Simon Lax, Miguel Lentino, Iris I. Levin, Pierre Liancourt, Wenju Liang, Alexandra M. Linz, David A. Lipson, Yongqin Liu, Manuel E. Lladser, Mariana Lozada, Catherine M. Spirito, Walter P. MacCormack, Aurora MacRae-Crerar, Magda Magris, Antonio M. Mart\ń-Platero, Manuel Mart\‘-́Vivaldi, L. Margarita Mart\‘iź, Manuel Mart\‘in-́Bueno, Ezequiel M. Marzinelli, Olivia U. Mason, Gregory D. Mayer, Jamie M. McDevitt-Irwin, James E. McDonald, Krista L. McGuire, Katherine D. McMahon, Ryan McMinds, Mónica Medina, Joseph R. Mendelson, Jessica L. Metcalf, Folker Meyer, Fabian Michelangeli, Kim Miller, David A. Mills, Jeremiah Minich, Stefano Mocali, Lucas Moitinho-Silva, Anni Moore, Rachael M. Morgan-Kiss, Paul Munroe, David Myrold, Josh D. Neufeld, Yingying Ni, Graeme W. Nicol, Shaun Nielsen, Jozef I. Nissimov, Kefeng Niu, Matthew J. Nolan, Karen Noyce, Sarah L. O’Brien, Noriko Okamoto, Ludovic Orlando, Yadira Ortiz Castellano, Olayinka Osuolale, Wyatt Oswald, Jacob Parnell, Juan M. Peralta-Sánchez, Peter Petraitis, Catherine Pfister, Elizabeth Pilon-Smits, Paola Piombino, Stephen B. Pointing, F. Joseph Pollock, Caitlin Potter, Bharath Prithiviraj, Christopher Quince, Asha Rani, Ravi Ranjan, Subramanya Rao, Andrew P. Rees, Miles Richardson, Ulf Riebesell, Carol Robinson, Karl J. Rockne, Selena Marie Rodriguezl, Forest Rohwer, Wayne Roundstone, Rebecca J. Safran, Naseer Sangwan, Virginia Sanz, Matthew Schrenk, Mark D. Schrenzel, Nicole M. Scott, Rita L. Seger, Andaine Seguin-Orlando, Lucy Seldin, Lauren M. Seyler, Baddr Shakhsheer, Gabriela M. Sheets, Congcong Shen, Yu Shi, Hakdong Shin, Benjamin D. Shogan, Dave Shutler, Jeffrey Siegel, Steve Simmons, Sara Sjöling, Daniel P. Smith, Juan J. Soler, Martin Sperling, Peter D. Steinberg, Brent Stephens, Melita A. Stevens, Safiyh Taghavi, Vera Tai, Karen Tait, Chia L. Tan, ̧ Neslihan Tas, D. Lee Taylor, Torsten Thomas, Ina Timling, Benjamin L. Turner, Tim Urich, Luke K. Ursell, Daniel van der Lelie, William Van Treuren, Lukas van Zwieten, Daniela Vargas-Robles, Rebecca Vega Thurber, Paola Vitaglione, Donald A. Walker, William A. Walters, Shi Wang, Tao Wang, Tom Weaver, Nicole S. Webster, Beck Wehrle, Pamela Weisenhorn, Sophie Weiss, Jeffrey J. Werner, Kristin West, Andrew Whitehead, Susan R. Whitehead, Linda A. Whittingham, Eske Willerslev, Allison E. Williams, Stephen A. Wood, Douglas C. Woodhams, Yeqin Yang, Jesse Zaneveld, Iratxe Zarraonaindia, Qikun Zhang, Hongxia Zhao
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A Communal Catalogue Reveals Earth's Multiscale Microbial Diversity.
Nature.
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Amnon Amir, Daniel McDonald, Jose A. Navas-Molina, Evguenia Kopylova, James T. Morton, Zhenjiang Zech Xu, Eric P. Kightley, Luke R. Thompson, Embriette R. Hyde, Antonio Gonzalez, Rob Knight
(2017).
Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns.
mSystems.
DOI
Sophie Weiss, Zhenjiang Zech Xu, Shyamal Peddada, Amnon Amir, Kyle Bittinger, Antonio Gonzalez, Catherine Lozupone, Jesse R. Zaneveld, Yoshiki Vázquez-Baeza, Amanda Birmingham, Embriette R. Hyde, Rob Knight
(2017).
Normalization and Microbial Differential Abundance Strategies Depend upon Data Characteristics.
Microbiome.
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Sophie Weiss, Will Van Treuren, Catherine Lozupone, Karoline Faust, Jonathan Friedman, Ye Deng, Li Charlie Xia, Zhenjiang Zech Xu, Luke Ursell, Eric J. Alm, Amanda Birmingham, Jacob A. Cram, Jed A. Fuhrman, Jeroen Raes, Fengzhu Sun, Jizhong Zhou, Rob Knight
(2016).
Correlation Detection Strategies in Microbial Data Sets Vary Widely in Sensitivity and Precision.
ISME J.
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Jessica L. Metcalf, Zhenjiang Zech Xu, Sophie Weiss, Simon Lax, Will Van Treuren, Embriette R. Hyde, Se Jin Song, Amnon Amir, Peter Larsen, Naseer Sangwan, Daniel Haarmann, Greg C. Humphrey, Gail Ackermann, Luke R. Thompson, Christian Lauber, Alexander Bibat, Catherine Nicholas, Matthew J. Gebert, Joseph F. Petrosino, Sasha C. Reed, Jack A. Gilbert, Aaron M. Lynne, Sibyl R. Bucheli, David O. Carter, Rob Knight
(2016).
Microbial Community Assembly and Metabolic Function during Mammalian Corpse Decomposition.
Science.
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Alexandra J. Obregon-Tito, Raul Y. Tito, Jessica Metcalf, Krithivasan Sankaranarayanan, Jose C. Clemente, Luke K. Ursell, Zhenjiang Xu, Will Van Treuren, Rob Knight, Patrick M. Gaffney, Paul Spicer, Paul Lawson, Luis Marin-Reyes, Omar Trujillo-Villarroel, Morris Foster, Emilio Guija-Poma, Luzmila Troncoso-Corzo, Christina Warinner, Andrew T. Ozga, Cecil M. Lewis
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Subsistence Strategies in Traditional Societies Distinguish Gut Microbiomes.
Nat Commun.
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José A. Navas-Molina, Juan M. Peralta-Sánchez, Antonio González, Paul J. McMurdie, Yoshiki Vázquez-Baeza, Zhenjiang Xu, Luke K. Ursell, Christian Lauber, Hongwei Zhou, Se Jin Song, James Huntley, Gail L. Ackermann, Donna Berg-Lyons, Susan Holmes, J. Gregory Caporaso, Rob Knight
(2013).
Advancing Our Understanding of the Human Microbiome Using QIIME.
Methods in Enzymology.